Orrella dioscoreae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Orrella

Description

Orrella dioscoreae is characterized by having a single replicon, which is an important trait for its genomic structure and functioning. This bacterium is cataloged under the accession number NZ_LT907988.1, indicating its identification and classification within microbial databases. The study of Orrella dioscoreae contributes to our understanding of microbial diversity and ecology, particularly in relation to its host, Dioscorea species, which are commonly known as yams. The relationship between the bacterium and its plant host may play a significant role in the health and development of these plants. Understanding the genomic traits of Orrella dioscoreae can provide insights into its ecological interactions and potential applications in agriculture or biotechnology, especially considering the significance of yams as a staple food source in many regions. Further research into this bacterium may elucidate its roles in nutrient cycling or plant health, highlighting its importance in the ecosystem where it resides.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusOrrella
SpeciesOrrella dioscoreae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Orrella dioscoreae isolate Orrdi1 chromosome I, complete sequence.

Gene Summary

Adenine Count

790150 bp

Thymine Count

788745 bp

Guanine Count

1634131 bp

Cytosine Count

1635075 bp

Genome Length

4848101 bp

Protein-coding Genes

4296 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family proteinODI_RS12455Not AvailablePositive2657760 - 265911851242.7
gnat family n-acetyltransferaseODI_RS12460Not AvailablePositive2659115 - 265974423421.8
iuca/iucc family siderophore biosynthesis proteinODI_RS12465Not AvailablePositive2659741 - 266160970483.1
siderophore ferric iron reductaseODI_RS12470Not AvailablePositive2661650 - 266239927441.1
aromatic ring-hydroxylating dioxygenase subunit alphaODI_RS12475Not AvailablePositive2662443 - 266360644347.4
helix-turn-helix transcriptional regulatorODI_RS12480Not AvailablePositive2663759 - 266470335086.8
multidrug effflux mfs transporterODI_RS12485Not AvailablePositive2664919 - 266610641251.7
tonb-dependent siderophore receptorODI_RS12490Not AvailablePositive2666223 - 266841579916.1
abc transporter substrate-binding proteinODI_RS12495Not AvailablePositive2668459 - 266956838146.5
iron abc transporter permeaseODI_RS12500Not AvailablePositive2669655 - 267059931677.7

Displaying genes 2541 – 2550 of 4458 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.