Orrella dioscoreae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Orrella

Description

Orrella dioscoreae is characterized by having a single replicon, which is an important trait for its genomic structure and functioning. This bacterium is cataloged under the accession number NZ_LT907988.1, indicating its identification and classification within microbial databases. The study of Orrella dioscoreae contributes to our understanding of microbial diversity and ecology, particularly in relation to its host, Dioscorea species, which are commonly known as yams. The relationship between the bacterium and its plant host may play a significant role in the health and development of these plants. Understanding the genomic traits of Orrella dioscoreae can provide insights into its ecological interactions and potential applications in agriculture or biotechnology, especially considering the significance of yams as a staple food source in many regions. Further research into this bacterium may elucidate its roles in nutrient cycling or plant health, highlighting its importance in the ecosystem where it resides.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusOrrella
SpeciesOrrella dioscoreae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Orrella dioscoreae isolate Orrdi1 chromosome I, complete sequence.

Gene Summary

Adenine Count

790150 bp

Thymine Count

788745 bp

Guanine Count

1634131 bp

Cytosine Count

1635075 bp

Genome Length

4848101 bp

Protein-coding Genes

4296 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate signaling complex protein phouODI_RS08220Not AvailablePositive1761016 - 176174127439.1
oxidative damage protection proteinODI_RS08225Not AvailableNegative1761827 - 176209910459.3
amino-acid n-acetyltransferaseODI_RS08230Not AvailableNegative1762199 - 176355449074.8
atp-dependent rna helicase hrpaODI_RS08235Not AvailablePositive1763690 - 1767547144215.0
mfs transporterODI_RS08240Not AvailablePositive1767875 - 176901138999.7
lipid a hydroxylase lpxoODI_RS08245Not AvailableNegative1769116 - 177001534161.4
dna polymerase iii subunit alphaODI_RS08250Not AvailablePositive1770095 - 1773592129977.0
glycosyltransferase family 2 proteinODI_RS08255Not AvailablePositive1773607 - 177436528067.6
ykgj family cysteine cluster proteinODI_RS08260Not AvailableNegative1774380 - 17746379010.87
ydcf family proteinODI_RS08265Not AvailableNegative1774643 - 177541027541.5

Displaying genes 1741 – 1750 of 4458 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.