Rhodobacter xanthinilyticus

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter xanthinilyticus is a rod-shaped bacterium that possesses flagella, enabling motility. This organism is characterized by having a single replicon, which is significant in understanding its genetic structure and replication processes. The specific accession number for Rhodobacter xanthinilyticus is NZ_CP017784.1, which serves as a reference for genomic data. As a member of the Rhodobacter genus, this bacterium is expected to exhibit metabolic versatility, commonly associated with phototrophic and heterotrophic capabilities. The presence of flagella suggests that Rhodobacter xanthinilyticus may actively navigate its environment, which is relevant for its ecological interactions, such as nutrient acquisition or competition with other microorganisms. The ecological insight that can be drawn from the characteristics of Rhodobacter xanthinilyticus involves its potential roles in biogeochemical cycles, particularly in aquatic environments where members of the Rhodobacter genus are known to contribute to the degradation of organic matter. This metabolic activity can enhance nutrient availability and influence the microbial community structure in its habitat. Understanding such traits is essential for elucidating the ecological functions of Rhodobacter xanthinilyticus in its natural environment.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter xanthinilyticus strain LPB0142 plasmid pEJ03, complete

Gene Summary

Adenine Count

5356 bp

Thymine Count

5068 bp

Guanine Count

7105 bp

Cytosine Count

7247 bp

Genome Length

24776 bp

Protein-coding Genes

29 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chloramphenicol/florfenicol efflux mfs transporter florLPB142_RS18260Not AvailableNegative13465 - 1467942714.4
lysr family transcriptional regulatorLPB142_RS18265Not AvailableNegative14995 - 1595734850.2
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnLPB142_RS18270Not AvailableNegative15970 - 1698037308.5
tetr/acrr family transcriptional regulatorLPB142_RS18275Not AvailableNegative17137 - 1769720419.9
is1380-like element is1247 family transposaseLPB142_RS18280Not AvailablePositive17785 - 1914051153.2
ardc family proteinLPB142_RS18285Not AvailableNegative19487 - 2052137843.7
type ii toxin-antitoxin system rele/pare family toxinLPB142_RS18290Not AvailablePositive20898 - 2117310591.6
higa family addiction module antitoxinLPB142_RS18295Not AvailablePositive21183 - 2148210919.2
ardc family proteinLPB142_RS18300Not AvailableNegative21665 - 2254832905.0

Displaying genes 21 – 29 of 29 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.