Rhodobacter xanthinilyticus

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter xanthinilyticus is a rod-shaped bacterium that possesses flagella, enabling motility. This organism is characterized by having a single replicon, which is significant in understanding its genetic structure and replication processes. The specific accession number for Rhodobacter xanthinilyticus is NZ_CP017784.1, which serves as a reference for genomic data. As a member of the Rhodobacter genus, this bacterium is expected to exhibit metabolic versatility, commonly associated with phototrophic and heterotrophic capabilities. The presence of flagella suggests that Rhodobacter xanthinilyticus may actively navigate its environment, which is relevant for its ecological interactions, such as nutrient acquisition or competition with other microorganisms. The ecological insight that can be drawn from the characteristics of Rhodobacter xanthinilyticus involves its potential roles in biogeochemical cycles, particularly in aquatic environments where members of the Rhodobacter genus are known to contribute to the degradation of organic matter. This metabolic activity can enhance nutrient availability and influence the microbial community structure in its habitat. Understanding such traits is essential for elucidating the ecological functions of Rhodobacter xanthinilyticus in its natural environment.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter xanthinilyticus strain LPB0142 plasmid pEJ03, complete

Gene Summary

Adenine Count

5356 bp

Thymine Count

5068 bp

Guanine Count

7105 bp

Cytosine Count

7247 bp

Genome Length

24776 bp

Protein-coding Genes

29 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinase family proteinLPB142_RS18235Not AvailableNegative5216 - 575519988.9
competence protein coiaLPB142_RS19305Not AvailableNegative5880 - 656926557.7
hypothetical proteinLPB142_RS19310Not AvailableNegative6694 - 736523587.4
had family hydrolaseLPB142_RS18860Not AvailableNegative7365 - 805426371.6
is1380-like element is1247 family transposaseLPB142_RS18240Not AvailablePositive8142 - 949751153.2
ardc family proteinLPB142_RS19740Not AvailableNegative10218 - 104036734.83
lysr family transcriptional regulatorLPB142_RS19745Not AvailableNegative10340 - 1126333282.3
tetracycline efflux mfs transporter tet(g)LPB142_RS18250Not AvailableNegative11353 - 1252840717.6
tetracycline resistance transcriptional repressor tetr(g)LPB142_RS18255Not AvailablePositive12632 - 1325823365.6
ardc family proteinLPB142_RS19485Not AvailableNegative13255 - 133714262.24

Displaying genes 11 – 20 of 29 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.