Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | COO09_00295 | Not Available | Positive | 63782 - 64657 | 33065.0 |
| endonuclease domain-containing protein | COO09_00300 | Not Available | Positive | 64654 - 65112 | 16328.7 |
| glycine--trna ligase subunit beta | COO09_00305 | Not Available | Positive | 65109 - 67124 | 71949.6 |
| pyruvate, phosphate dikinase | COO09_00310 | Not Available | Positive | 67181 - 69853 | 96363.5 |
| duf418 domain-containing protein | COO09_00315 | Not Available | Positive | 70034 - 71197 | 42445.1 |
| hypothetical protein | COO09_00320 | Not Available | Negative | 71202 - 71774 | 21296.3 |
| pilus assembly protein tadc | COO09_00325 | Not Available | Negative | 71853 - 72845 | 36144.2 |
| pilus assembly protein tadb | COO09_00330 | Not Available | Negative | 72856 - 73830 | 35785.8 |
| pilus assembly protein cpae | COO09_00335 | Not Available | Negative | 73867 - 75132 | 45049.5 |
| hypothetical protein | COO09_00340 | Not Available | Negative | 75132 - 75770 | 21896.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
