Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | COO09_00245 | Not Available | Positive | 52462 - 53985 | 54484.4 |
| class i sam-dependent methyltransferase | COO09_00250 | Not Available | Negative | 54015 - 55040 | 38616.7 |
| duf1295 domain-containing protein | COO09_00255 | Not Available | Negative | 55040 - 55882 | 31172.3 |
| nad/fad-binding protein | COO09_00260 | Not Available | Positive | 56124 - 57503 | 50621.4 |
| duf1365 domain-containing protein | COO09_00265 | Not Available | Positive | 57500 - 58300 | 30050.4 |
| nucleoside-diphosphate kinase | COO09_00270 | Not Available | Positive | 58297 - 58770 | 16804.7 |
| phna protein | COO09_00275 | Not Available | Negative | 58800 - 59099 | 10886.9 |
| catalase/peroxidase hpi | COO09_00280 | Not Available | Negative | 59267 - 61468 | 79632.1 |
| dna-binding response regulator | COO09_00285 | Not Available | Negative | 61729 - 62424 | 25712.3 |
| trab/gumn family protein | COO09_00290 | Not Available | Negative | 62586 - 63527 | 34048.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
