Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glutamate--ammonia ligase | COO09_00195 | Not Available | Negative | 43476 - 44888 | 52054.9 |
| duf3240 domain-containing protein | COO09_00200 | Not Available | Negative | 44964 - 45302 | 12175.8 |
| type i methionyl aminopeptidase | COO09_00205 | Not Available | Negative | 45509 - 46348 | 30405.5 |
| competence/damage-inducible protein a | COO09_00210 | Not Available | Positive | 46417 - 47187 | 27453.3 |
| mfs transporter | COO09_00215 | Not Available | Negative | 47412 - 48647 | 43014.7 |
| duf2177 domain-containing protein | COO09_00220 | Not Available | Positive | 48793 - 49221 | 15359.1 |
| aldehyde-activating protein | COO09_00225 | Not Available | Positive | 49218 - 49592 | 13942.6 |
| rnb domain-containing ribonuclease | COO09_00230 | Not Available | Negative | 49638 - 51020 | 49152.0 |
| taud/tfda family dioxygenase | COO09_00235 | Not Available | Negative | 51061 - 51987 | 34600.3 |
| hypothetical protein | COO09_00240 | Not Available | Negative | 52123 - 52440 | 12092.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
