Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | COO09_19235 | Not Available | Positive | 4014152 - 4015198 | 37835.1 |
| atp-dependent protease atpase subunit hslu | COO09_19240 | Not Available | Positive | 4015213 - 4016514 | 47834.3 |
| duf1134 domain-containing protein | COO09_19245 | Not Available | Negative | 4016623 - 4017396 | 26255.2 |
| Trna-ser | Not Available | Not Available | Positive | 4017551 - 4017643 | Not Available |
| duf4365 domain-containing protein | COO09_19255 | Not Available | Positive | 4017918 - 4018472 | 20446.6 |
| hypothetical protein | COO09_19260 | Not Available | Positive | 4018463 - 4019674 | 44256.6 |
| resolvase | COO09_19265 | Not Available | Negative | 4019714 - 4020313 | 21468.6 |
| histidine utilization repressor | COO09_19270 | Not Available | Negative | 4021421 - 4022149 | 26222.6 |
| formimidoylglutamate deiminase | COO09_19275 | Not Available | Negative | 4022146 - 4023516 | 49263.5 |
| imidazolonepropionase | COO09_19280 | Not Available | Positive | 4023609 - 4024802 | 41941.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
