Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nark/nasa family nitrate transporter | COO09_18635 | Not Available | Negative | 3883668 - 3884876 | 41285.6 |
| hypothetical protein | COO09_18640 | Not Available | Negative | 3885347 - 3886609 | 46553.2 |
| nitrate abc transporter atp-binding protein | COO09_18645 | Not Available | Negative | 3886723 - 3887526 | 29260.7 |
| nitrate abc transporter, permease protein | COO09_18650 | Not Available | Negative | 3887541 - 3888494 | 33948.2 |
| bicarbonate-binding protein | COO09_18655 | Not Available | Negative | 3888517 - 3889821 | 46489.4 |
| nitrate transporter | COO09_18660 | Not Available | Negative | 3890046 - 3891251 | 43616.5 |
| two-component system response regulator | COO09_18665 | Not Available | Negative | 3891248 - 3891829 | 21094.5 |
| carboxymuconolactone decarboxylase family protein | COO09_18670 | Not Available | Positive | 3891999 - 3892457 | 16719.9 |
| rna polymerase sigma factor sigj | COO09_18675 | Not Available | Positive | 3892454 - 3893314 | 31360.8 |
| transketolase | COO09_18680 | Not Available | Negative | 3893362 - 3895713 | 84242.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
