Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | COO09_18380 | Not Available | Negative | 3835283 - 3836179 | 33729.6 |
| tetr/acrr family transcriptional regulator | COO09_18385 | Not Available | Positive | 3836333 - 3836926 | 21976.2 |
| 4-oxalocrotonate tautomerase | COO09_18390 | Not Available | Positive | 3836998 - 3837222 | 7744.33 |
| carboxymuconolactone decarboxylase family protein | COO09_18395 | Not Available | Positive | 3837257 - 3837832 | 20662.8 |
| hypothetical protein | COO09_18405 | Not Available | Positive | 3838557 - 3839207 | 24118.1 |
| peroxidase | COO09_18410 | Not Available | Negative | 3839211 - 3839810 | 21875.2 |
| hypothetical protein | COO09_18415 | Not Available | Negative | 3839823 - 3840443 | 21485.2 |
| nucleoside:proton symporter | COO09_18420 | Not Available | Negative | 3840470 - 3841735 | 44373.7 |
| tonb-dependent receptor | COO09_18425 | Not Available | Negative | 3841750 - 3844779 | 107826.0 |
| duf3179 domain-containing protein | COO09_18430 | Not Available | Positive | 3844928 - 3845914 | 36413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
