Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbc | COO09_18330 | Not Available | Positive | 3826664 - 3826996 | 11279.1 |
| conjugal transfer protein | COO09_18335 | Not Available | Positive | 3826996 - 3827271 | 9742.06 |
| conjugal transfer protein trbe | COO09_18340 | Not Available | Positive | 3827277 - 3829727 | 89598.8 |
| p-type conjugative transfer protein trbj | COO09_18345 | Not Available | Positive | 3829733 - 3830506 | 27630.8 |
| hypothetical protein | COO09_18350 | Not Available | Positive | 3830511 - 3830867 | 12865.3 |
| p-type conjugative transfer protein trbl | COO09_18355 | Not Available | Positive | 3830869 - 3832185 | 44103.5 |
| conjugal transfer protein trbf | COO09_18360 | Not Available | Positive | 3832191 - 3832874 | 25216.0 |
| p-type conjugative transfer protein trbg | COO09_18365 | Not Available | Positive | 3832871 - 3833881 | 36539.1 |
| conjugal transfer protein trai | COO09_18370 | Not Available | Positive | 3833878 - 3835071 | 41162.1 |
| duf2274 domain-containing protein | COO09_18375 | Not Available | Positive | 3835068 - 3835295 | 8275.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
