Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2840 domain-containing protein | COO09_18280 | Not Available | Positive | 3818264 - 3818704 | 16708.0 |
| s26 family signal peptidase | COO09_18285 | Not Available | Positive | 3818701 - 3819279 | 20714.0 |
| duf736 domain-containing protein | COO09_18290 | Not Available | Positive | 3819283 - 3819612 | 11888.8 |
| lytic transglycosylase | COO09_18295 | Not Available | Positive | 3819617 - 3820318 | 24418.1 |
| duf3363 domain-containing protein | COO09_18300 | Not Available | Positive | 3820566 - 3822311 | 64266.9 |
| hypothetical protein | COO09_18305 | Not Available | Negative | 3822315 - 3822608 | 10828.8 |
| hypothetical protein | COO09_18310 | Not Available | Negative | 3822616 - 3822813 | 7285.48 |
| conjugal transfer protein trag | COO09_18315 | Not Available | Positive | 3823030 - 3825018 | 73252.3 |
| copg family transcriptional regulator | COO09_18320 | Not Available | Positive | 3825015 - 3825404 | 14558.4 |
| p-type conjugative transfer atpase trbb | COO09_18325 | Not Available | Positive | 3825684 - 3826646 | 33695.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
