Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | COO09_18020 | Not Available | Positive | 3766425 - 3767285 | 32015.7 |
| n-acetyltransferase | COO09_18025 | Not Available | Positive | 3767301 - 3767885 | 21781.6 |
| hypothetical protein | COO09_18030 | Not Available | Negative | 3767882 - 3768679 | 27758.6 |
| lipoate-protein ligase b | COO09_18035 | Not Available | Positive | 3768829 - 3769485 | 23715.5 |
| hypothetical protein | COO09_18040 | Not Available | Positive | 3769562 - 3769795 | 7517.83 |
| 7-carboxy-7-deazaguanine synthase | COO09_18050 | Not Available | Negative | 3770697 - 3771329 | 23041.4 |
| 7-cyano-7-deazaguanine synthase quec | COO09_18055 | Not Available | Negative | 3771329 - 3772021 | 24652.5 |
| peptidase m20 | COO09_18060 | Not Available | Negative | 3772055 - 3773656 | 56935.1 |
| peptidase | COO09_18065 | Not Available | Positive | 3773711 - 3774490 | 27977.0 |
| hypothetical protein | COO09_18070 | Not Available | Negative | 3774680 - 3775156 | 16391.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
