Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25 | COO09_17920 | Not Available | Positive | 3749113 - 3749736 | 22081.4 |
| aminoacyl-trna hydrolase | COO09_17925 | Not Available | Positive | 3749928 - 3750497 | 20502.5 |
| hypothetical protein | COO09_17930 | Not Available | Positive | 3750676 - 3751995 | 44750.3 |
| hypothetical protein | COO09_17935 | Not Available | Negative | 3752000 - 3752314 | 11536.0 |
| sensor domain-containing diguanylate cyclase | COO09_17940 | Not Available | Positive | 3752486 - 3754267 | 64093.3 |
| hypothetical protein | COO09_17945 | Not Available | Negative | 3754315 - 3754992 | 24567.4 |
| hypothetical protein | COO09_17950 | Not Available | Positive | 3755031 - 3755477 | 16320.5 |
| hypothetical protein | COO09_17955 | Not Available | Negative | 3755556 - 3756185 | 21582.2 |
| dna-binding response regulator | COO09_17960 | Not Available | Positive | 3756298 - 3757089 | 28287.0 |
| sensor histidine kinase | COO09_17965 | Not Available | Positive | 3757086 - 3758447 | 48036.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
