Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_17870 | Not Available | Negative | 3742197 - 3742418 | 7905.95 |
| dihydrolipoyl dehydrogenase | COO09_17875 | Not Available | Negative | 3742574 - 3743971 | 50112.8 |
| acyl-coa thioesterase | COO09_17880 | Not Available | Negative | 3743990 - 3744379 | 13755.4 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | COO09_17885 | Not Available | Negative | 3744381 - 3745688 | 44614.0 |
| universal stress protein | COO09_17890 | Not Available | Positive | 3745826 - 3746281 | 15800.1 |
| hypothetical protein | COO09_17895 | Not Available | Negative | 3746503 - 3746991 | 17041.4 |
| hxxee domain-containing protein | COO09_17900 | Not Available | Positive | 3747071 - 3747547 | 17109.4 |
| aminoacyl-trna hydrolase | COO09_17905 | Not Available | Positive | 3747586 - 3748008 | 15578.8 |
| duf2171 domain-containing protein | COO09_17910 | Not Available | Negative | 3748005 - 3748253 | 8566.95 |
| rna pseudouridine synthase | COO09_17915 | Not Available | Negative | 3748309 - 3748968 | 23626.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
