Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s10 | COO09_17820 | Not Available | Negative | 3732591 - 3732902 | 11674.3 |
| elongation factor tu | COO09_17825 | Not Available | Negative | 3733020 - 3734210 | 42929.5 |
| elongation factor g | COO09_17830 | Not Available | Negative | 3734287 - 3736359 | 76212.2 |
| 30s ribosomal protein s7 | COO09_17835 | Not Available | Negative | 3736424 - 3736894 | 17624.2 |
| 30s ribosomal protein s12 | COO09_17840 | Not Available | Negative | 3736908 - 3737279 | 13921.1 |
| divalent-cation tolerance protein cuta | COO09_17845 | Not Available | Negative | 3737527 - 3737844 | 11410.7 |
| cation transporter | COO09_17850 | Not Available | Negative | 3737871 - 3738782 | 32899.9 |
| l,d-transpeptidase | COO09_17855 | Not Available | Positive | 3738939 - 3740219 | 46360.9 |
| hypothetical protein | COO09_17860 | Not Available | Positive | 3740379 - 3741017 | 22636.0 |
| d-alanyl-d-alanine carboxypeptidase | COO09_17865 | Not Available | Positive | 3741180 - 3742082 | 31530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
