Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s17 | COO09_17770 | Not Available | Negative | 3727459 - 3727719 | 9865.95 |
| 50s ribosomal protein l29 | COO09_17775 | Not Available | Negative | 3727732 - 3727935 | 7512.05 |
| 50s ribosomal protein l16 | COO09_17780 | Not Available | Negative | 3727937 - 3728368 | 15910.6 |
| 30s ribosomal protein s3 | COO09_17785 | Not Available | Negative | 3728431 - 3729126 | 25767.7 |
| 50s ribosomal protein l22 | COO09_17790 | Not Available | Negative | 3729128 - 3729511 | 13695.8 |
| 30s ribosomal protein s19 | COO09_17795 | Not Available | Negative | 3729511 - 3729783 | 10127.2 |
| 50s ribosomal protein l2 | COO09_17800 | Not Available | Negative | 3729787 - 3730623 | 30356.7 |
| 50s ribosomal protein l23 | COO09_17805 | Not Available | Negative | 3730628 - 3730942 | 11386.8 |
| 50s ribosomal protein l4 | COO09_17810 | Not Available | Negative | 3730935 - 3731561 | 22625.6 |
| 50s ribosomal protein l3 | COO09_17815 | Not Available | Negative | 3731564 - 3732319 | 26640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
