Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | COO09_17670 | Not Available | Negative | 3712600 - 3714738 | 79005.3 |
| 50s ribosomal protein l17 | COO09_17675 | Not Available | Negative | 3714836 - 3715258 | 15394.6 |
| dna-directed rna polymerase subunit alpha | COO09_17680 | Not Available | Negative | 3715400 - 3716461 | 38204.8 |
| 30s ribosomal protein s11 | COO09_17685 | Not Available | Negative | 3716566 - 3716955 | 13944.7 |
| 30s ribosomal protein s13 | COO09_17690 | Not Available | Negative | 3717041 - 3717409 | 13755.0 |
| acyltransferase | COO09_17695 | Not Available | Positive | 3717849 - 3718901 | 38400.0 |
| nadp-specific glutamate dehydrogenase | COO09_17700 | Not Available | Negative | 3718940 - 3720301 | 49415.0 |
| hypothetical protein | COO09_17705 | Not Available | Negative | 3720491 - 3720763 | 10655.3 |
| adenylate kinase | COO09_17710 | Not Available | Negative | 3720851 - 3721498 | 22928.5 |
| preprotein translocase subunit secy | COO09_17715 | Not Available | Negative | 3721495 - 3722862 | 49164.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
