Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_17470 | Not Available | Negative | 3663638 - 3663901 | 9820.4 |
| hypothetical protein | COO09_17475 | Not Available | Negative | 3663901 - 3664176 | 9853.32 |
| hypothetical protein | COO09_17480 | Not Available | Negative | 3664176 - 3664547 | 13353.1 |
| hybrid sensor histidine kinase/response regulator | COO09_17485 | Not Available | Positive | 3664870 - 3670248 | 192132.0 |
| hybrid sensor histidine kinase/response regulator | COO09_17490 | Not Available | Positive | 3670113 - 3672314 | 80452.7 |
| aspartate/glutamate racemase family protein | COO09_17495 | Not Available | Positive | 3672342 - 3673031 | 25004.3 |
| nad-dependent dna ligase liga | COO09_17500 | Not Available | Positive | 3673113 - 3675239 | 76478.5 |
| deda family protein | COO09_17505 | Not Available | Positive | 3675339 - 3675971 | 23371.0 |
| pyridoxal phosphate-dependent aminotransferase | COO09_17510 | Not Available | Positive | 3675968 - 3677125 | 41567.5 |
| atp-dependent helicase | COO09_17515 | Not Available | Negative | 3677289 - 3678632 | 49010.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
