Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3800 domain-containing protein | COO09_17420 | Not Available | Positive | 3652728 - 3653639 | 34420.5 |
| hypothetical protein | COO09_17425 | Not Available | Positive | 3654198 - 3654485 | 10493.2 |
| fructose-bisphosphatase class ii | COO09_17430 | Not Available | Negative | 3654878 - 3655849 | 33903.1 |
| homoserine dehydrogenase | COO09_17435 | Not Available | Negative | 3655928 - 3657220 | 44639.7 |
| hypothetical protein | COO09_17440 | Not Available | Positive | 3657420 - 3657719 | 11438.4 |
| osmc family peroxiredoxin | COO09_17445 | Not Available | Negative | 3657783 - 3658208 | 14883.5 |
| alpha/beta hydrolase | COO09_17450 | Not Available | Positive | 3658312 - 3659229 | 32441.1 |
| hypothetical protein | COO09_17455 | Not Available | Negative | 3659332 - 3660900 | 58128.4 |
| acyltransferase | COO09_17460 | Not Available | Negative | 3660917 - 3661981 | 37767.1 |
| dna repair protein recn | COO09_17465 | Not Available | Positive | 3661980 - 3663641 | 59078.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
