Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_17070 | Not Available | Negative | 3578101 - 3580794 | 98710.1 |
| hypothetical protein | COO09_17075 | Not Available | Positive | 3581170 - 3581958 | 26115.3 |
| lysr family transcriptional regulator | COO09_17080 | Not Available | Positive | 3582170 - 3583078 | 32494.8 |
| nadh-quinone oxidoreductase subunit e | COO09_17085 | Not Available | Positive | 3583169 - 3583648 | 16742.1 |
| formate dehydrogenase | COO09_17090 | Not Available | Positive | 3583645 - 3585261 | 56071.4 |
| formate dehydrogenase subunit alpha | COO09_17095 | Not Available | Positive | 3585266 - 3588112 | 103648.0 |
| formate dehydrogenase | COO09_17100 | Not Available | Positive | 3588154 - 3588375 | 7842.48 |
| sulfurtransferase fdhd | COO09_17105 | Not Available | Positive | 3588378 - 3589160 | 27566.1 |
| molybdenum cofactor guanylyltransferase | COO09_17110 | Not Available | Positive | 3589157 - 3589732 | 19838.8 |
| long-chain fatty acid--coa ligase | COO09_17115 | Not Available | Positive | 3589858 - 3591492 | 59788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
