Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| set domain-containing protein-lysine n-methyltransferase | COO09_16965 | Not Available | Negative | 3558274 - 3558738 | 16631.6 |
| atp-binding protein | COO09_16970 | Not Available | Negative | 3558781 - 3559179 | 14273.1 |
| hypothetical protein | COO09_16980 | Not Available | Negative | 3559828 - 3561006 | 41471.4 |
| crp/fnr family transcriptional regulator | COO09_16985 | Not Available | Negative | 3561003 - 3561368 | 12730.6 |
| hamp domain-containing protein | COO09_16990 | Not Available | Negative | 3561365 - 3562489 | 39494.8 |
| mfs transporter | COO09_16995 | Not Available | Negative | 3562479 - 3564899 | 87525.3 |
| stage ii sporulation protein e | COO09_17000 | Not Available | Positive | 3564994 - 3566610 | 59320.0 |
| porin family protein | COO09_17005 | Not Available | Positive | 3566818 - 3567345 | 18246.5 |
| endonuclease | COO09_17010 | Not Available | Positive | 3567622 - 3569481 | 68087.5 |
| hypothetical protein | COO09_17015 | Not Available | Positive | 3569517 - 3569915 | 14113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
