Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | COO09_16915 | Not Available | Negative | 3544054 - 3544998 | 33885.2 |
| rna polymerase sigma factor | COO09_16920 | Not Available | Negative | 3545037 - 3545549 | 19004.5 |
| hypothetical protein | COO09_16925 | Not Available | Negative | 3545546 - 3547129 | 57315.2 |
| hypothetical protein | COO09_16930 | Not Available | Negative | 3547126 - 3548526 | 49400.1 |
| magnesium transporter cora | COO09_16935 | Not Available | Positive | 3548602 - 3549648 | 38064.9 |
| tonb-dependent receptor | COO09_16940 | Not Available | Positive | 3549758 - 3552532 | 100447.0 |
| 3-phytase | COO09_16945 | Not Available | Positive | 3552538 - 3553575 | 36261.9 |
| dienelactone hydrolase family protein | COO09_16950 | Not Available | Positive | 3553762 - 3554490 | 26080.2 |
| bifunctional diguanylate cyclase/phosphodiesterase | COO09_16955 | Not Available | Positive | 3554857 - 3556983 | 77561.9 |
| diaminopimelate decarboxylase | COO09_16960 | Not Available | Negative | 3557091 - 3558287 | 42545.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
