Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | COO09_16865 | Not Available | Negative | 3526559 - 3527419 | 31099.5 |
| glucose dehydrogenase | COO09_16870 | Not Available | Negative | 3527498 - 3529426 | 68489.6 |
| hypothetical protein | COO09_16875 | Not Available | Positive | 3529797 - 3530048 | 8677.91 |
| tetr/acrr family transcriptional regulator | COO09_16880 | Not Available | Negative | 3530426 - 3530953 | 18906.0 |
| tonb-dependent receptor | COO09_16885 | Not Available | Positive | 3531214 - 3533034 | 64674.2 |
| ribonucleotide-diphosphate reductase subunit beta | COO09_16890 | Not Available | Negative | 3533678 - 3534730 | 40438.4 |
| hypothetical protein | COO09_16895 | Not Available | Negative | 3534742 - 3534963 | 7826.99 |
| ribonucleotide-diphosphate reductase subunit alpha | COO09_16900 | Not Available | Negative | 3535107 - 3537077 | 72419.8 |
| autotransporter domain-containing protein | COO09_16905 | Not Available | Negative | 3537866 - 3541111 | 108152.0 |
| tonb-dependent receptor | COO09_16910 | Not Available | Negative | 3541634 - 3544081 | 86902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
