Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | COO09_16810 | Not Available | Negative | 3517406 - 3518659 | 46943.0 |
| hypothetical protein | COO09_16815 | Not Available | Negative | 3518990 - 3519721 | 26590.2 |
| hypothetical protein | COO09_16820 | Not Available | Positive | 3519825 - 3520592 | 26637.9 |
| nadph:quinone oxidoreductase | COO09_16825 | Not Available | Negative | 3520743 - 3521744 | 36658.0 |
| tetr/acrr family transcriptional regulator | COO09_16830 | Not Available | Negative | 3521741 - 3522367 | 22253.8 |
| oxidoreductase | COO09_16835 | Not Available | Positive | 3522469 - 3523284 | 28778.5 |
| hypothetical protein | COO09_16840 | Not Available | Negative | 3523610 - 3523690 | 2706.29 |
| sensor histidine kinase | COO09_16845 | Not Available | Negative | 3523666 - 3524187 | 18991.8 |
| hamp domain-containing protein | COO09_16850 | Not Available | Negative | 3524135 - 3524617 | 17783.7 |
| winged helix family transcriptional regulator | COO09_16855 | Not Available | Negative | 3524933 - 3525250 | 12259.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
