Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | COO09_16705 | Not Available | Positive | 3492504 - 3493856 | 47935.9 |
| hypothetical protein | COO09_16710 | Not Available | Positive | 3495114 - 3497123 | 72749.7 |
| membrane dipeptidase | COO09_16715 | Not Available | Positive | 3497120 - 3498112 | 35636.9 |
| capsule biosynthesis protein capa | COO09_16720 | Not Available | Positive | 3498126 - 3499301 | 42572.7 |
| dna-binding protein | COO09_16725 | Not Available | Negative | 3499823 - 3500026 | 7672.17 |
| dna-binding protein | COO09_16730 | Not Available | Negative | 3500034 - 3500303 | 9775.13 |
| hypothetical protein | COO09_16735 | Not Available | Negative | 3500484 - 3501302 | 29304.4 |
| ti-type conjugative transfer relaxase traa | COO09_16740 | Not Available | Negative | 3501313 - 3504198 | 106320.0 |
| conjugal transfer protein trad | COO09_16745 | Not Available | Positive | 3504371 - 3504676 | 10791.8 |
| conjugal transfer protein trad | COO09_16750 | Not Available | Positive | 3504699 - 3504926 | 8588.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
