Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_16445 | Not Available | Negative | 3427471 - 3427731 | 9076.08 |
| sigma-54-dependent fis family transcriptional regulator | COO09_16455 | Not Available | Negative | 3428167 - 3429399 | 45545.9 |
| hypothetical protein | COO09_16460 | Not Available | Positive | 3430325 - 3431041 | 27180.1 |
| coa transferase | COO09_16465 | Not Available | Positive | 3431291 - 3432490 | 43308.7 |
| crotonase | COO09_16470 | Not Available | Positive | 3432516 - 3433295 | 28443.2 |
| nadph:quinone oxidoreductase | COO09_16475 | Not Available | Positive | 3433335 - 3434324 | 34702.0 |
| 3-hydroxyacyl-coa dehydrogenase | COO09_16480 | Not Available | Positive | 3434344 - 3435792 | 51440.5 |
| enoyl-coa hydratase | COO09_16485 | Not Available | Positive | 3435783 - 3436541 | 26950.3 |
| tetr/acrr family transcriptional regulator | COO09_16495 | Not Available | Positive | 3437007 - 3437663 | 23779.8 |
| tetr/acrr family transcriptional regulator | COO09_16500 | Not Available | Positive | 3438067 - 3438690 | 23052.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
