Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_16345 | Not Available | Negative | 3407335 - 3408987 | 57268.2 |
| hypothetical protein | COO09_16350 | Not Available | Positive | 3409118 - 3411331 | 78757.5 |
| spermidine synthase | COO09_16355 | Not Available | Negative | 3411328 - 3411996 | 23516.6 |
| hypothetical protein | COO09_16360 | Not Available | Negative | 3411993 - 3412316 | 11610.8 |
| succinate dehydrogenase flavoprotein subunit | COO09_16365 | Not Available | Negative | 3412419 - 3414206 | 64813.2 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | COO09_16370 | Not Available | Negative | 3414206 - 3414595 | 13933.4 |
| succinate dehydrogenase, cytochrome b556 subunit | COO09_16375 | Not Available | Negative | 3414595 - 3415005 | 14848.4 |
| chemotaxis protein | COO09_16380 | Not Available | Positive | 3415181 - 3416542 | 48099.4 |
| 3-oxoacyl-acp reductase | COO09_16385 | Not Available | Positive | 3416818 - 3417534 | 25241.9 |
| 50s ribosomal protein l11 methyltransferase | COO09_16390 | Not Available | Positive | 3417524 - 3418498 | 34761.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
