Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty-acid--coa ligase | COO09_15990 | Not Available | Negative | 3331573 - 3333099 | 55150.6 |
| enoyl-coa hydratase | COO09_15995 | Not Available | Negative | 3333226 - 3334044 | 28902.6 |
| acyl-coa dehydrogenase | COO09_16000 | Not Available | Positive | 3334361 - 3335512 | 41876.4 |
| dehydrogenase | COO09_16005 | Not Available | Positive | 3335639 - 3337600 | 70276.0 |
| nucleotide exchange factor grpe | COO09_16010 | Not Available | Negative | 3338029 - 3338571 | 20095.8 |
| 8-amino-7-oxononanoate synthase | COO09_16015 | Not Available | Positive | 3338900 - 3340009 | 38634.1 |
| atp-dependent dethiobiotin synthetase biod | COO09_16020 | Not Available | Positive | 3340006 - 3340635 | 22285.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | COO09_16025 | Not Available | Positive | 3340632 - 3341885 | 45657.2 |
| hypothetical protein | COO09_16030 | Not Available | Positive | 3342081 - 3342968 | 31240.7 |
| hypothetical protein | COO09_16035 | Not Available | Positive | 3343050 - 3343730 | 26054.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
