Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | COO09_15940 | Not Available | Negative | 3318264 - 3320624 | 85982.6 |
| tannase/feruloyl esterase family alpha/beta hydrolase | COO09_15945 | Not Available | Positive | 3321474 - 3323123 | 58241.9 |
| nadh:flavin oxidoreductase | COO09_15950 | Not Available | Positive | 3323128 - 3324273 | 40984.9 |
| 3-alpha-hydroxysteroid dehydrogenase | COO09_15955 | Not Available | Positive | 3324336 - 3325145 | 28087.6 |
| acetyl-coa acetyltransferase | COO09_15960 | Not Available | Negative | 3325173 - 3326672 | 52659.4 |
| enoyl-coa hydratase | COO09_15965 | Not Available | Negative | 3326707 - 3327504 | 27861.7 |
| short-chain dehydrogenase | COO09_15970 | Not Available | Negative | 3327591 - 3328373 | 27758.4 |
| acyl-coa dehydrogenase | COO09_15975 | Not Available | Negative | 3328370 - 3329578 | 44307.2 |
| phosphotransferase family protein | COO09_15980 | Not Available | Negative | 3329578 - 3330555 | 35950.2 |
| alpha/beta hydrolase | COO09_15985 | Not Available | Negative | 3330618 - 3331493 | 33221.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
