Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_15730 | Not Available | Positive | 3270522 - 3270869 | 12744.0 |
| hypothetical protein | COO09_15735 | Not Available | Positive | 3270866 - 3271735 | 31776.0 |
| Trna-thr | Not Available | Not Available | Positive | 3271754 - 3271829 | Not Available |
| nad(p)-dependent oxidoreductase | COO09_15745 | Not Available | Negative | 3272215 - 3273012 | 27634.4 |
| gluconolactonase | COO09_15750 | Not Available | Negative | 3273012 - 3274055 | 37665.0 |
| 3-keto-5-aminohexanoate cleavage protein | COO09_15755 | Not Available | Negative | 3274134 - 3275060 | 33894.8 |
| hypothetical protein | COO09_15760 | Not Available | Negative | 3275118 - 3275879 | 25807.1 |
| sugar phosphate isomerase/epimerase | COO09_15765 | Not Available | Negative | 3276033 - 3277049 | 37419.4 |
| dehydrogenase | COO09_15770 | Not Available | Negative | 3276946 - 3277824 | 31016.3 |
| tonb-dependent receptor | COO09_15775 | Not Available | Negative | 3277908 - 3280040 | 77385.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
