Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase | COO09_15675 | Not Available | Negative | 3261187 - 3261765 | 20780.8 |
| ybhb/ybcl family raf kinase inhibitor-like protein | COO09_15680 | Not Available | Negative | 3261768 - 3262394 | 21702.9 |
| exodeoxyribonuclease iii | COO09_15685 | Not Available | Positive | 3262505 - 3263311 | 30083.8 |
| entericidin, ecna/b family | COO09_15695 | Not Available | Positive | 3264875 - 3265000 | 4233.37 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | COO09_15700 | Not Available | Positive | 3265055 - 3266383 | 47597.9 |
| low affinity iron permease family protein | COO09_15705 | Not Available | Negative | 3266396 - 3266806 | 15047.2 |
| glycosyltransferase family 1 protein | COO09_15710 | Not Available | Positive | 3266923 - 3268104 | 44009.1 |
| duf2218 domain-containing protein | COO09_15715 | Not Available | Negative | 3268145 - 3268462 | 11549.6 |
| padr family transcriptional regulator | COO09_15720 | Not Available | Negative | 3268462 - 3269076 | 22248.8 |
| replication-associated recombination protein a | COO09_15725 | Not Available | Positive | 3269212 - 3270525 | 47757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
