Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moxr family atpase | COO09_15525 | Not Available | Positive | 3234324 - 3235169 | 32014.6 |
| hypothetical protein | COO09_15530 | Not Available | Positive | 3235274 - 3235684 | 15014.8 |
| duf159 family protein | COO09_15535 | Not Available | Negative | 3235713 - 3236324 | 22627.9 |
| hypothetical protein | COO09_15540 | Not Available | Negative | 3236635 - 3236823 | 7271.72 |
| glutathione peroxidase | COO09_15545 | Not Available | Positive | 3236988 - 3237536 | 19652.2 |
| efflux rnd transporter periplasmic adaptor subunit | COO09_15550 | Not Available | Positive | 3237846 - 3239123 | 44970.6 |
| multidrug efflux rnd transporter permease subunit | COO09_15555 | Not Available | Positive | 3239328 - 3242504 | 112833.0 |
| tolc family protein | COO09_15560 | Not Available | Positive | 3242519 - 3243967 | 51249.7 |
| hypothetical protein | COO09_15565 | Not Available | Positive | 3244041 - 3244529 | 17444.0 |
| n-acetyltransferase | COO09_15570 | Not Available | Negative | 3244552 - 3245082 | 20115.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
