Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_15425 | Not Available | Negative | 3216472 - 3217134 | 23267.2 |
| translation initiation factor if-3 | COO09_15430 | Not Available | Negative | 3217274 - 3217813 | 20671.2 |
| iron-sulfur cluster assembly accessory protein | COO09_15435 | Not Available | Negative | 3217981 - 3218334 | 12292.5 |
| suf system fe-s cluster assembly protein | COO09_15440 | Not Available | Negative | 3218422 - 3218898 | 17002.1 |
| cysteine desulfurase | COO09_15445 | Not Available | Negative | 3218895 - 3220106 | 43199.7 |
| sufbd protein | COO09_15450 | Not Available | Negative | 3220106 - 3221188 | 37737.5 |
| fe-s cluster assembly atpase sufc | COO09_15455 | Not Available | Negative | 3221358 - 3222101 | 26712.4 |
| endonuclease domain-containing protein | COO09_15460 | Not Available | Negative | 3222104 - 3222466 | 13387.9 |
| hypothetical protein | COO09_15465 | Not Available | Negative | 3222586 - 3223173 | 20472.6 |
| fe-s cluster assembly protein sufb | COO09_15470 | Not Available | Negative | 3223170 - 3224642 | 54096.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
