Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | COO09_15375 | Not Available | Positive | 3207344 - 3207898 | 19348.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | COO09_15380 | Not Available | Negative | 3207904 - 3208425 | 18186.0 |
| rrna pseudouridine synthase | COO09_15385 | Not Available | Negative | 3208422 - 3209291 | 31794.0 |
| chemotaxis protein | COO09_15390 | Not Available | Negative | 3209358 - 3210383 | 37200.9 |
| glucose-6-phosphate isomerase | COO09_15395 | Not Available | Positive | 3210598 - 3212073 | 52959.5 |
| voc family protein | COO09_15400 | Not Available | Positive | 3212248 - 3212634 | 13877.2 |
| hypothetical protein | COO09_15405 | Not Available | Positive | 3212631 - 3213245 | 22265.8 |
| hypothetical protein | COO09_15410 | Not Available | Positive | 3213242 - 3214573 | 47231.1 |
| hypothetical protein | COO09_15415 | Not Available | Positive | 3214558 - 3215814 | 44071.3 |
| duf4331 domain-containing protein | COO09_15420 | Not Available | Negative | 3215756 - 3216472 | 25036.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
