Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | COO09_15265 | Not Available | Positive | 3184486 - 3188136 | 128080.0 |
| hypothetical protein | COO09_15270 | Not Available | Negative | 3188361 - 3189497 | 42182.7 |
| 50s ribosomal protein l36 | COO09_15280 | Not Available | Positive | 3190409 - 3190534 | 5096.3 |
| had family phosphatase | COO09_15285 | Not Available | Positive | 3190591 - 3191160 | 21447.6 |
| crp/fnr family transcriptional regulator | COO09_15290 | Not Available | Negative | 3191254 - 3191961 | 25093.3 |
| pyruvate kinase | COO09_15295 | Not Available | Negative | 3192280 - 3193737 | 52510.7 |
| duf2312 domain-containing protein | COO09_15300 | Not Available | Positive | 3193956 - 3194219 | 9931.12 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | COO09_15305 | Not Available | Positive | 3194443 - 3195300 | 30259.7 |
| hypothetical protein | COO09_15310 | Not Available | Positive | 3195402 - 3196109 | 25514.6 |
| pyrrolo-quinoline quinone | COO09_15315 | Not Available | Positive | 3196114 - 3197448 | 46369.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
