Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | COO09_15210 | Not Available | Positive | 3175063 - 3177105 | 70739.9 |
| hypothetical protein | COO09_15215 | Not Available | Negative | 3177212 - 3177658 | 15536.7 |
| hypothetical protein | COO09_15220 | Not Available | Negative | 3177658 - 3178134 | 16237.7 |
| hypothetical protein | COO09_15225 | Not Available | Negative | 3178131 - 3178808 | 24004.4 |
| nad(+) synthase | COO09_15230 | Not Available | Negative | 3178830 - 3180890 | 74075.6 |
| trna glutamyl-q(34) synthetase gluqrs | COO09_15235 | Not Available | Negative | 3180977 - 3181831 | 30315.3 |
| hnh endonuclease | COO09_15240 | Not Available | Positive | 3182005 - 3182571 | 22038.1 |
| pilz domain-containing protein | COO09_15245 | Not Available | Positive | 3182699 - 3183037 | 12180.4 |
| rna polymerase sigma factor | COO09_15250 | Not Available | Positive | 3183129 - 3183701 | 21230.5 |
| hypothetical protein | COO09_15260 | Not Available | Negative | 3183958 - 3184188 | 7761.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
