Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_00090 | Not Available | Positive | 20355 - 20636 | 9979.56 |
| hypothetical protein | COO09_00095 | Not Available | Positive | 20895 - 21188 | 9902.31 |
| extensin | COO09_00100 | Not Available | Positive | 21230 - 21946 | 26181.0 |
| rna polymerase sigma factor | COO09_00105 | Not Available | Positive | 22018 - 22677 | 23763.5 |
| duf4880 domain-containing protein | COO09_00110 | Not Available | Positive | 22622 - 22870 | 8881.22 |
| n-acetyltransferase | COO09_00115 | Not Available | Positive | 22938 - 23426 | 17131.7 |
| putative o-glycosylation ligase, exosortase a system-associated | COO09_00125 | Not Available | Negative | 24658 - 26154 | 55239.0 |
| hypothetical protein | COO09_00130 | Not Available | Negative | 26147 - 26350 | 7471.12 |
| glycosyltransferase, exosortase a system-associated | COO09_00135 | Not Available | Positive | 26414 - 27619 | 44122.4 |
| hypothetical protein | COO09_00140 | Not Available | Positive | 27716 - 29419 | 58216.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
