Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretory pathway component pulk-like protein | COO09_15150 | Not Available | Negative | 3165319 - 3166191 | 29960.1 |
| hypothetical protein | COO09_15160 | Not Available | Negative | 3166733 - 3167788 | 35090.8 |
| hypothetical protein | COO09_15165 | Not Available | Positive | 3167749 - 3168483 | 25621.9 |
| type ii secretion system protein gspf | COO09_15170 | Not Available | Negative | 3168645 - 3169862 | 43044.3 |
| type ii secretion system protein gspe | COO09_15175 | Not Available | Negative | 3169862 - 3171307 | 52483.2 |
| type ii secretion system protein m | COO09_15180 | Not Available | Negative | 3171304 - 3171804 | 17873.8 |
| general secretion pathway protein gspl | COO09_15185 | Not Available | Negative | 3171801 - 3172889 | 36676.4 |
| type ii secretion system protein gspg | COO09_15190 | Not Available | Positive | 3172912 - 3173394 | 17419.8 |
| type ii secretion system protein gsph | COO09_15195 | Not Available | Positive | 3173394 - 3173855 | 15712.7 |
| type ii secretion system protein gspi | COO09_15200 | Not Available | Positive | 3173852 - 3174223 | 12767.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
