Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_15100 | Not Available | Positive | 3154974 - 3155171 | 7055.73 |
| phosphoribosyl-atp diphosphatase | COO09_15105 | Not Available | Positive | 3155362 - 3155682 | 11029.3 |
| histidine triad nucleotide-binding protein | COO09_15110 | Not Available | Positive | 3155778 - 3156164 | 14013.7 |
| amino acid permease | COO09_15115 | Not Available | Positive | 3156271 - 3157794 | 52857.7 |
| adenosine kinase | COO09_15120 | Not Available | Negative | 3157845 - 3158843 | 34567.4 |
| hypothetical protein | COO09_15125 | Not Available | Positive | 3158935 - 3159309 | 13280.0 |
| glutathione s-transferase family protein | COO09_15130 | Not Available | Negative | 3159319 - 3159969 | 24334.9 |
| oxygenase | COO09_15135 | Not Available | Positive | 3160068 - 3160703 | 23459.8 |
| hypothetical protein | COO09_15140 | Not Available | Positive | 3160835 - 3162358 | 51751.1 |
| tonb-dependent receptor | COO09_15145 | Not Available | Positive | 3162437 - 3165124 | 96819.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
