Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | COO09_14890 | Not Available | Negative | 3122245 - 3123237 | 34639.9 |
| cytochrome p450 | COO09_14895 | Not Available | Negative | 3123241 - 3124482 | 46760.7 |
| tetr/acrr family transcriptional regulator | COO09_14900 | Not Available | Negative | 3124537 - 3125175 | 24016.6 |
| glucose-methanol-choline oxidoreductase | COO09_14905 | Not Available | Negative | 3125215 - 3126810 | 57850.4 |
| esta family serine hydrolase | COO09_14910 | Not Available | Negative | 3126807 - 3127949 | 41470.5 |
| hypothetical protein | COO09_14920 | Not Available | Negative | 3129036 - 3129467 | 15575.2 |
| hypothetical protein | COO09_14925 | Not Available | Positive | 3129606 - 3129926 | 11430.7 |
| duf4167 domain-containing protein | COO09_14930 | Not Available | Negative | 3129993 - 3130850 | 31961.4 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | COO09_14935 | Not Available | Negative | 3131149 - 3131973 | 28170.8 |
| peptide chain release factor 1 | COO09_14940 | Not Available | Negative | 3131966 - 3133051 | 39515.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
