Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1214 domain-containing protein | COO09_14840 | Not Available | Negative | 3111747 - 3112919 | 44515.2 |
| lysr family transcriptional regulator | COO09_14845 | Not Available | Positive | 3113088 - 3113981 | 32710.6 |
| nad-dependent oxidoreductase | COO09_14850 | Not Available | Negative | 3113988 - 3114668 | 22240.6 |
| nuclear transport factor 2 family protein | COO09_14855 | Not Available | Negative | 3114680 - 3115231 | 21400.1 |
| amidohydrolase | COO09_14860 | Not Available | Negative | 3115255 - 3116988 | 63229.9 |
| enterotoxin | COO09_14865 | Not Available | Negative | 3117074 - 3118186 | 40908.7 |
| metal-dependent hydrolase | COO09_14870 | Not Available | Negative | 3118186 - 3119034 | 33350.7 |
| cytochrome p450 | COO09_14875 | Not Available | Negative | 3119058 - 3120353 | 49290.8 |
| marr family transcriptional regulator | COO09_14880 | Not Available | Negative | 3120428 - 3120958 | 20188.3 |
| cytochrome p450 | COO09_14885 | Not Available | Negative | 3121008 - 3122231 | 45696.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
