Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | COO09_14740 | Not Available | Negative | 3095195 - 3096079 | 30415.1 |
| short-chain dehydrogenase | COO09_14745 | Not Available | Negative | 3096079 - 3096834 | 25842.0 |
| (2fe-2s)-binding protein | COO09_14750 | Not Available | Negative | 3096850 - 3098193 | 51504.0 |
| oxidoreductase | COO09_14755 | Not Available | Positive | 3098365 - 3099162 | 27496.9 |
| duf1254 domain-containing protein | COO09_14760 | Not Available | Positive | 3099176 - 3100363 | 45334.1 |
| nuclear transport factor 2 family protein | COO09_14765 | Not Available | Negative | 3100427 - 3100870 | 16957.3 |
| nad(p)-dependent oxidoreductase | COO09_14770 | Not Available | Negative | 3100870 - 3101667 | 28128.9 |
| paai family thioesterase | COO09_14775 | Not Available | Negative | 3101761 - 3102192 | 15562.8 |
| enoyl-coa hydratase | COO09_14780 | Not Available | Positive | 3102333 - 3103241 | 33229.5 |
| nuclear transport factor 2 family protein | COO09_14785 | Not Available | Negative | 3103233 - 3103655 | 15585.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
