Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | COO09_14690 | Not Available | Positive | 3083462 - 3084793 | 50809.0 |
| 3-ketosteroid-delta-1-dehydrogenase | COO09_14695 | Not Available | Positive | 3084793 - 3086445 | 59827.9 |
| transcriptional regulator | COO09_14700 | Not Available | Negative | 3086456 - 3087436 | 35884.4 |
| phytanoyl-coa dioxygenase | COO09_14705 | Not Available | Positive | 3087544 - 3088500 | 35744.8 |
| oxidoreductase | COO09_14710 | Not Available | Positive | 3088517 - 3089335 | 27804.7 |
| aminoglycoside phosphotransferase | COO09_14715 | Not Available | Positive | 3089332 - 3090414 | 39719.5 |
| tonb-dependent receptor | COO09_14720 | Not Available | Positive | 3090575 - 3092899 | 83758.6 |
| nad(p)-dependent oxidoreductase | COO09_14725 | Not Available | Negative | 3092957 - 3093889 | 32735.9 |
| hypothetical protein | COO09_14730 | Not Available | Positive | 3094009 - 3094251 | 9062.62 |
| short-chain dehydrogenase | COO09_14735 | Not Available | Negative | 3094248 - 3095198 | 33138.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
