Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | COO09_14635 | Not Available | Positive | 3070552 - 3071784 | 46651.5 |
| iclr family transcriptional regulator | COO09_14640 | Not Available | Negative | 3071807 - 3072616 | 29349.6 |
| iclr family transcriptional regulator | COO09_14645 | Not Available | Positive | 3072755 - 3073594 | 31448.7 |
| alcohol dehydrogenase | COO09_14650 | Not Available | Positive | 3073611 - 3074585 | 33210.5 |
| pimeloyl-coa dehydrogenase large subunit | COO09_14655 | Not Available | Positive | 3074661 - 3075845 | 43542.8 |
| pimeloyl-coa dehydrogenase small subunit | COO09_14660 | Not Available | Positive | 3075852 - 3076982 | 39304.3 |
| phytanoyl-coa dioxygenase | COO09_14665 | Not Available | Negative | 3077019 - 3078005 | 35711.4 |
| nadph nitroreductase | COO09_14670 | Not Available | Negative | 3078116 - 3079075 | 34141.7 |
| enoyl-coa hydratase/isomerase family protein | COO09_14675 | Not Available | Negative | 3079081 - 3079914 | 30721.1 |
| acyl-coa dehydrogenase | COO09_14685 | Not Available | Positive | 3082280 - 3083434 | 41572.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
