Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | COO09_14425 | Not Available | Positive | 3022923 - 3023750 | 29364.6 |
| abc transporter atp-binding protein | COO09_14430 | Not Available | Negative | 3023804 - 3024484 | 24302.4 |
| abc transporter permease | COO09_14435 | Not Available | Negative | 3024481 - 3025731 | 44670.1 |
| efflux rnd transporter periplasmic adaptor subunit | COO09_14440 | Not Available | Negative | 3025728 - 3026732 | 36109.4 |
| universal stress protein uspa | COO09_14445 | Not Available | Negative | 3026753 - 3027550 | 29091.1 |
| alcohol dehydrogenase | COO09_14455 | Not Available | Negative | 3028250 - 3029287 | 36540.1 |
| hypothetical protein | COO09_14460 | Not Available | Positive | 3029709 - 3030263 | 19324.0 |
| pep-cterm sorting domain-containing protein | COO09_14465 | Not Available | Negative | 3030288 - 3031406 | 39882.7 |
| n-acetyltransferase | COO09_14470 | Not Available | Positive | 3031011 - 3031637 | 23028.5 |
| acrb/acrd/acrf family protein | COO09_14475 | Not Available | Negative | 3032146 - 3035364 | 115092.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
