Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_14275 | Not Available | Negative | 2996754 - 2997191 | 16538.3 |
| tonb-dependent receptor | COO09_14280 | Not Available | Negative | 2997305 - 2999512 | 80099.7 |
| hypothetical protein | COO09_14285 | Not Available | Positive | 2999994 - 3000194 | 6720.18 |
| tetr/acrr family transcriptional regulator | COO09_14290 | Not Available | Positive | 3000191 - 3000991 | 30090.2 |
| hypothetical protein | COO09_14295 | Not Available | Positive | 3001189 - 3002418 | 45760.0 |
| cytochrome p450 | COO09_14300 | Not Available | Positive | 3002632 - 3003840 | 44648.8 |
| short-chain dehydrogenase | COO09_14305 | Not Available | Positive | 3003837 - 3004799 | 33880.4 |
| hypothetical protein | COO09_14310 | Not Available | Positive | 3004576 - 3005364 | 28324.9 |
| 3-oxoacyl-acp reductase | COO09_14315 | Not Available | Positive | 3005389 - 3006189 | 27780.2 |
| hypothetical protein | COO09_14320 | Not Available | Positive | 3006189 - 3006656 | 16537.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
