Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | COO09_14175 | Not Available | Negative | 2978312 - 2978914 | 21055.2 |
| inorganic triphosphatase | COO09_14180 | Not Available | Negative | 2978925 - 2980397 | 55077.4 |
| aminotransferase class v-fold plp-dependent enzyme | COO09_14185 | Not Available | Negative | 2980508 - 2981620 | 39143.8 |
| tryptophan 2,3-dioxygenase | COO09_14190 | Not Available | Negative | 2981617 - 2982363 | 28915.7 |
| lrp/asnc family transcriptional regulator | COO09_14195 | Not Available | Positive | 2982528 - 2982995 | 16934.3 |
| prolyl aminopeptidase | COO09_14200 | Not Available | Positive | 2982992 - 2983954 | 35737.0 |
| amino acid permease | COO09_14205 | Not Available | Positive | 2983951 - 2985345 | 48085.1 |
| proline hydroxylase | COO09_14210 | Not Available | Positive | 2985395 - 2986093 | 26060.9 |
| pilz domain-containing protein | COO09_14215 | Not Available | Negative | 2986113 - 2986475 | 13020.7 |
| pilz domain-containing protein | COO09_14220 | Not Available | Negative | 2986639 - 2987169 | 18670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
