Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | COO09_14070 | Not Available | Negative | 2957423 - 2958037 | 23064.9 |
| chorismate mutase | COO09_14075 | Not Available | Positive | 2958286 - 2958609 | 11733.1 |
| acyltransferase | COO09_14080 | Not Available | Negative | 2958622 - 2959689 | 39209.0 |
| sterol desaturase | COO09_14085 | Not Available | Negative | 2959807 - 2960646 | 31350.4 |
| pep-cterm sorting domain-containing protein | COO09_14090 | Not Available | Negative | 2960701 - 2961258 | 19938.6 |
| rrna methyltransferase | COO09_14095 | Not Available | Negative | 2961884 - 2962600 | 25885.1 |
| transcriptional repressor nrdr | COO09_14100 | Not Available | Negative | 2962758 - 2963222 | 17210.3 |
| serine hydroxymethyltransferase | COO09_14105 | Not Available | Negative | 2963228 - 2964544 | 46562.5 |
| ribose 5-phosphate isomerase b | COO09_14110 | Not Available | Negative | 2964541 - 2964999 | 16247.3 |
| polysaccharide biosynthesis protein | COO09_14115 | Not Available | Positive | 2965163 - 2966590 | 50114.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
