Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus dicambivorans |
| Strain | Ndbn-20m |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
904801 bp
Thymine Count
909038 bp
Guanine Count
1719569 bp
Cytosine Count
1714086 bp
Genome Length
5247494 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein activator lpob | COO09_13870 | Not Available | Positive | 2915699 - 2916331 | 23083.7 |
| hypothetical protein | COO09_13875 | Not Available | Positive | 2916345 - 2917811 | 52178.8 |
| hypothetical protein | COO09_13880 | Not Available | Positive | 2917832 - 2918308 | 17269.0 |
| hypothetical protein | COO09_13885 | Not Available | Positive | 2918305 - 2918610 | 10508.2 |
| hypothetical protein | COO09_13890 | Not Available | Positive | 2918610 - 2919443 | 29435.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | COO09_13895 | Not Available | Positive | 2919660 - 2920142 | 17386.6 |
| Trna-lys | Not Available | Not Available | Positive | 2920180 - 2920255 | Not Available |
| flp family type ivb pilin | COO09_13905 | Not Available | Positive | 2920666 - 2920833 | 5745.05 |
| dna helicase ii | COO09_13910 | Not Available | Positive | 2921008 - 2923311 | 85497.8 |
| mfs transporter | COO09_13915 | Not Available | Positive | 2923401 - 2924678 | 44752.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
